Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-340 in GLB Brain Sun Cluster 49 Table contains all genes in the GLB Brain Sun cluster number 49. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-340 6908 TBP TATA box binding protein [Source:HGNC Symbol;Acc:11588] T 1284 COL4A2 collagen, type IV, alpha 2 [Source:HGNC Symbol;Acc:2203] zzz999 1060 CENPC1 centromere protein C 1 [Source:HGNC Symbol;Acc:1854] T 9943 OXSR1 oxidative-stress responsive 1 [Source:HGNC Symbol;Acc:8508] zzz999 373863 DND1 dead end homolog 1 (zebrafish) [Source:HGNC Symbol;Acc:23799] zzz999 1515 CTSL2 cathepsin L2 [Source:HGNC Symbol;Acc:2538] zzz999 23469 PHF3 PHD finger protein 3 [Source:HGNC Symbol;Acc:8921] P T 81873 ARPC5L actin related protein 2/3 complex, subunit 5-like [Source:HGNC Symbol;Acc:23366] zzz999 9662 CEP135 centrosomal protein 135kDa [Source:HGNC Symbol;Acc:29086] zzz999 27338 UBE2S ubiquitin-conjugating enzyme E2S [Source:HGNC Symbol;Acc:17895] zzz999 25853 DCAF12 DDB1 and CUL4 associated factor 12 [Source:HGNC Symbol;Acc:19911] P T 5238 PGM3 phosphoglucomutase 3 [Source:HGNC Symbol;Acc:8907] T 55608 ANKRD10 ankyrin repeat domain 10 [Source:HGNC Symbol;Acc:20265] T 54537 FAM35A family with sequence similarity 35, member A [Source:HGNC Symbol;Acc:28773] zzz999 25904 CNOT10 CCR4-NOT transcription complex, subunit 10 [Source:HGNC Symbol;Acc:23817] zzz999 94121 SYTL4 synaptotagmin-like 4 [Source:HGNC Symbol;Acc:15588] T 25936 NSL1 NSL1, MIND kinetochore complex component, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24548] T 158234 RG9MTD3 RNA (guanine-9-) methyltransferase domain containing 3 [Source:HGNC Symbol;Acc:26454] zzz999 5367 PMCH pro-melanin-concentrating hormone [Source:HGNC Symbol;Acc:9109] zzz999 50937 CDON Cdon homolog (mouse) [Source:HGNC Symbol;Acc:17104] P T 56254 RNF20 ring finger protein 20 [Source:HGNC Symbol;Acc:10062] zzz999 1462 VCAN versican [Source:HGNC Symbol;Acc:2464] zzz999 64780 MICAL1 microtubule associated monoxygenase, calponin and LIM domain containing 1 [Source:HGNC Symbol;Acc:20619] zzz999 57337 SENP7 SUMO1/sentrin specific peptidase 7 [Source:HGNC Symbol;Acc:30402] P T 23376 KIAA0776 KIAA0776 [Source:HGNC Symbol;Acc:23039] P T 66036 MTMR9 myotubularin related protein 9 [Source:HGNC Symbol;Acc:14596] T 154043 CNKSR3 CNKSR family member 3 [Source:HGNC Symbol;Acc:23034] zzz999 64863 METTL4 methyltransferase like 4 [Source:HGNC Symbol;Acc:24726] zzz999 7716 VEZF1 vascular endothelial zinc finger 1 [Source:HGNC Symbol;Acc:12949] T 64785 GINS3 GINS complex subunit 3 (Psf3 homolog) [Source:HGNC Symbol;Acc:25851] T 9656 MDC1 mediator of DNA-damage checkpoint 1 [Source:HGNC Symbol;Acc:21163] T 84930 MASTL microtubule associated serine/threonine kinase-like [Source:HGNC Symbol;Acc:19042] zzz999 54108 CHRAC1 chromatin accessibility complex 1 [Source:HGNC Symbol;Acc:13544] T 57763 ANKRA2 ankyrin repeat, family A (RFXANK-like), 2 [Source:HGNC Symbol;Acc:13208] T 151188 ARL6IP6 ADP-ribosylation-like factor 6 interacting protein 6 [Source:HGNC Symbol;Acc:24048] T 195828 ZNF367 zinc finger protein 367 [Source:HGNC Symbol;Acc:18320] zzz999 56262 LRRC8A leucine rich repeat containing 8 family, member A [Source:HGNC Symbol;Acc:19027] zzz999 51163 DBR1 debranching enzyme homolog 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:15594] P T 115825 WDFY2 WD repeat and FYVE domain containing 2 [Source:HGNC Symbol;Acc:20482] zzz999 9836 LCMT2 leucine carboxyl methyltransferase 2 [Source:HGNC Symbol;Acc:17558] T 7358 UGDH UDP-glucose 6-dehydrogenase [Source:HGNC Symbol;Acc:12525] T 11222 MRPL3 mitochondrial ribosomal protein L3 [Source:HGNC Symbol;Acc:10379] zzz999 5635 PRPSAP1 phosphoribosyl pyrophosphate synthetase-associated protein 1 [Source:HGNC Symbol;Acc:9466] zzz999 286257 C9orf142 chromosome 9 open reading frame 142 [Source:HGNC Symbol;Acc:27849] zzz999 4188 MDFI MyoD family inhibitor [Source:HGNC Symbol;Acc:6967] zzz999 90594 ZNF439 zinc finger protein 439 [Source:HGNC Symbol;Acc:20873] T 51115 FAM82B family with sequence similarity 82, member B [Source:HGNC Symbol;Acc:24285] T 91975 ZNF300 zinc finger protein 300 [Source:HGNC Symbol;Acc:13091] zzz999 10767 HBS1L HBS1-like (S. cerevisiae) [Source:HGNC Symbol;Acc:4834] zzz999 5194 PEX13 peroxisomal biogenesis factor 13 [Source:HGNC Symbol;Acc:8855] zzz999 63920 C5orf54 chromosome 5 open reading frame 54 [Source:HGNC Symbol;Acc:30804] zzz999 51351 ZNF117 zinc finger protein 117 [Source:HGNC Symbol;Acc:12897] T 7629 ZNF76 zinc finger protein 76 [Source:HGNC Symbol;Acc:13149] zzz999 9767 PHF16 PHD finger protein 16 [Source:HGNC Symbol;Acc:22982] T 11104 KATNA1 katanin p60 (ATPase containing) subunit A 1 [Source:HGNC Symbol;Acc:6216] zzz999 8434 RECK reversion-inducing-cysteine-rich protein with kazal motifs [Source:HGNC Symbol;Acc:11345] zzz999 387032 ZKSCAN4 zinc finger with KRAB and SCAN domains 4 [Source:HGNC Symbol;Acc:13854] zzz999 10541 ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:HGNC Symbol;Acc:16677] zzz999 2729 GCLC glutamate-cysteine ligase, catalytic subunit [Source:HGNC Symbol;Acc:4311] zzz999 10285 SMNDC1 survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:16900] zzz999 80010 RMI1 RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25764] T 54799 MBTD1 mbt domain containing 1 [Source:HGNC Symbol;Acc:19866] P T 9842 PLEKHM1 pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:HGNC Symbol;Acc:29017] zzz999 26984 SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:20260] T 51531 C9orf156 chromosome 9 open reading frame 156 [Source:HGNC Symbol;Acc:30967] zzz999 4040 LRP6 low density lipoprotein receptor-related protein 6 [Source:HGNC Symbol;Acc:6698] T 166815 TIGD2 tigger transposable element derived 2 [Source:HGNC Symbol;Acc:18333] T 51122 COMMD2 COMM domain containing 2 [Source:HGNC Symbol;Acc:24993] zzz999 5082 PDCL phosducin-like [Source:HGNC Symbol;Acc:8770] T 84343 HPS3 Hermansky-Pudlak syndrome 3 [Source:HGNC Symbol;Acc:15597] T 9925 ZBTB5 zinc finger and BTB domain containing 5 [Source:HGNC Symbol;Acc:23836] zzz999 55166 CENPQ centromere protein Q [Source:HGNC Symbol;Acc:21347] T 268 AMH anti-Mullerian hormone [Source:HGNC Symbol;Acc:464] zzz999 10585 POMT1 protein-O-mannosyltransferase 1 [Source:HGNC Symbol;Acc:9202] zzz999 1121 CHM choroideremia (Rab escort protein 1) [Source:HGNC Symbol;Acc:1940] T 80264 ZNF430 zinc finger protein 430 [Source:HGNC Symbol;Acc:20808] zzz999 7539 ZFP37 zinc finger protein 37 homolog (mouse) [Source:HGNC Symbol;Acc:12863] T 708 C1QBP complement component 1, q subcomponent binding protein [Source:HGNC Symbol;Acc:1243] zzz999 23 ABCF1 ATP-binding cassette, sub-family F (GCN20), member 1 [Source:HGNC Symbol;Acc:70] zzz999 7745 ZNF192 zinc finger protein 192 [Source:HGNC Symbol;Acc:12983] T 64151 NCAPG non-SMC condensin I complex, subunit G [Source:HGNC Symbol;Acc:24304] T 130497 OSR1 odd-skipped related 1 (Drosophila) [Source:HGNC Symbol;Acc:8111] zzz999 29929 ALG6 asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:23157] zzz999 55802 zzz999 zzz999 zzz999

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